PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV85293.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 259aa MW: 28950.7 Da PI: 10.3828 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.3 | 1.8e-18 | 96 | 146 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a++ ++g RWV85293.1 96 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALTIKG 146 68*****998.**********843...6**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MRKWRKRRGE KDQWRKNIRK KEEEEWDQRK VKENKTKREE ATIESLGMRR KQRGKLGRGS 60 KKIKGASKGG SKRVVETTAG GGGGEARKRS KDGKHPVYRG VRMRNWGKWV SEIREPRKKS 120 RIWLGTFPTA EMAARAHDVA ALTIKGQSAH LNFPELAAQL PRPASASPKD IQAAAMLAAA 180 TFCPTSLTPC TSSECSGAEP PASTTSSSDN DDALFDLPDL FLDLREGFCY SSSSSSSSWL 240 PCAGEDYVEF RVDEPFLWE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 5 | 32 | RKRRGEKDQWRKNIRKKEEEEWDQRKVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 2e-48 | ERF family protein |