PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV84838.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 386aa MW: 43682.5 Da PI: 5.0461

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV84838.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.3	8.3e-09	14	48	1	33
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..T CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..k 33 rg W++eEde+l+++++ +G +W+ ++ + g RWV84838.1 14 RGLWSPEEDEKLIRYITAHGYCCWSEVPMKAGpaS 48 788*************************9998553 PP
2	Myb_DNA-binding	27.1	9.7e-09	163	186	23	47
-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47 +W+ Ia++++ gRt++++k++w+++ RWV84838.1 163 RWAHIASHLP-GRTDNEIKNYWNSW 186 6*******.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MGHHSCCNQQ KVRRGLWSPE EDEKLIRYIT AHGYCCWSEV PMKAGPASTL SLSLSLSKVC 60 LCLSFEILML GSLYRASKVW QELPLKMDQL LETRHKARKD NAGGGEVNHQ PPRDCWEQVL 120 ICPLSEIIIS IKLLECLHCH IFYHEYDYIS GLISSSRWQI YRRWAHIASH LPGRTDNEIK 180 NYWNSWIKKK IRKPTTPQPP PSPRVELGHP SLDSMNQLDS TDLHQDLTSK SSLDPIFPSP 240 WPLFMFDDGG VSGRHSASSC TREEPLQEAT CSDLYNVPDH KQDEAEMPSL FDLVNSSMTY 300 NNLPPLVDDV ENTVTEEEAQ PCCLGDNGEV CGESFEKKGL GEWLVPQQYS CLLSWDDVRS 360 PIGDEAIITA SSSMAAMDTT FPLPWQ

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MGHHSCCNQQ KVRRGLWSPE EDEKLIRYIT AHGYCCWSEV PMKAGPASTL SLSLSLSKVC  60
LCLSFEILML GSLYRASKVW QELPLKMDQL LETRHKARKD NAGGGEVNHQ PPRDCWEQVL  120
ICPLSEIIIS IKLLECLHCH IFYHEYDYIS GLISSSRWQI YRRWAHIASH LPGRTDNEIK  180
NYWNSWIKKK IRKPTTPQPP PSPRVELGHP SLDSMNQLDS TDLHQDLTSK SSLDPIFPSP  240
WPLFMFDDGG VSGRHSASSC TREEPLQEAT CSDLYNVPDH KQDEAEMPSL FDLVNSSMTY  300
NNLPPLVDDV ENTVTEEEAQ PCCLGDNGEV CGESFEKKGL GEWLVPQQYS CLLSWDDVRS  360
PIGDEAIITA SSSMAAMDTT FPLPWQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63910.1	8e-23	MYB family protein