PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV83415.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 281aa MW: 31284 Da PI: 10.1441

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV83415.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.4	1.4e-17	51	96	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+q+G+ +W++Ia++++ gR++k+c++rw++ RWV83415.1 51 RGHWRPGEDEKLRQLVEQFGPQNWNSIAEKLQ-GRSGKSCRLRWFNQ 96 899***************************.*********996 PP
2	Myb_DNA-binding	58.2	1.9e-18	104	147	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T eE+e+l+ a++ +G++ W++I+r ++ gRt++ +k++w+ + RWV83415.1 104 RPFTDEEEERLLAAHRIHGNK-WALISRLFP-GRTDNAVKNHWHVV 147 69*****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
AALLPPASHP FSCCARSSSC RGGEGKLFSE VMGSSSKSAA GSDEGRRACL RGHWRPGEDE 60 KLRQLVEQFG PQNWNSIAEK LQGRSGKSCR LRWFNQLDPR INKRPFTDEE EERLLAAHRI 120 HGNKWALISR LFPGRTDNAV KNHWHVVMAR RRRERTRLFS VTTSFSVPPK GTAATTRHPP 180 SSDTGMLFGF GSGGSMLPWE FSTFGGSKLH SWSFHPYHLT YRSFVGDANC DRVTPRSIKL 240 SSLGHDSSET NPSSEHDGDD DGSLQRNRVP FIDFLGVGIT S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	1e-62	MYB family protein