PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWV83266.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 253aa MW: 26769.3 Da PI: 10.0589 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 30.2 | 6.1e-10 | 120 | 139 | 1 | 20 |
GATA 1 CsnCgttkTplWRrgpdgnk 20 C+nC tt+TplWR+gp+g+k RWV83266.1 120 CANCDTTSTPLWRNGPRGPK 139 ******************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 253 aa Download sequence |
MLHQCGHQSG SRPCSCGSTL FSVAFPVTGR QSTDEDHDVA RSCCSSPSSV DCTLSLGTPS 60 TRQTENNAAA LSTLFQRPSC VSSFGQDIIS QSKKKSNAFY GGATNGSNLG GDPLLLVRRC 120 ANCDTTSTPL WRNGPRGPKV RRLAGFTNTI REACGGVNGA TFVVVAGDIG SRGETAAVTL 180 ELLRFVRNER QLTHHHVRRR DGGPCGRVLP HLAVRRRAFA SVLGPKQAQP ISIPLDALAA 240 ALSSILSPRV SSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G50870.1 | 5e-17 | GATA family protein |