PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV83260.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 354aa    MW: 38927 Da    PI: 7.979
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV83260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH28.42.9e-09122144326
                 S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                  + C++f++ G Ck+Gd C FaHg
  RWV83260.1 122 SAACPDFRK-GGCKRGDACEFAHG 144
                 678******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MMGAEGGDRR HPAVVVPPWS SPFESPAAGI NYHLSAAGGE VDGGESTLPV LQRQLPFDAD  60
EAGWVEEPDS AVDVYSSDEF RMYEFKVRRC ARGRSHDWTE CPFVHPGEKA RRRDPRKYHY  120
SSAACPDFRK GGCKRGDACE FAHGVFECWL HPARYRTQPC KDGTTCARRV CFFAHAADQL  180
RILSHYPPTL PAVESYDGSP LRQQQALESY ISKKLMSSKT STLMSPPVSP PMSPSRMALR  240
RASWPVGTSL NEIVAALQQL QLTQANPAPS CWNLQLGDGP LGSPRCTAEG LNSGFCSRKD  300
KAAVRRGLAE GEEPVERVES GRALRAKIFE KLSKECVVER AEAAPPTPAP EVVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.15e-81C3H family protein