PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV82996.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 328aa MW: 36268.9 Da PI: 7.2369 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.5 | 5.5e-17 | 54 | 101 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl RWV82996.1 54 KGLWSPEEDEKLLNHITRFGHGCWSSVPKLAGLQRCGKSCRLRWINYL 101 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.9 | 3.6e-16 | 107 | 150 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l+vd+++ lG++ W+ Ia++++ gRt++++k++w++ RWV82996.1 107 RGTFSQQEEDLIVDLHAVLGNR-WSQIASRLP-GRTDNEIKNFWNS 150 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MQISSAHGSI CLTVNSPPFK NTPRCLIPLP TCFALRLQVD MGRHSSCYKP KLRKGLWSPE 60 EDEKLLNHIT RFGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGTF SQQEEDLIVD 120 LHAVLGNRWS QIASRLPGRT DNEIKNFWNS SLKKKLQQIG VDPNTHKPLD QADKAAGSSE 180 SKPFVSDGSH ASSFRHSPYG SNCGGDEKAS DGPLWFEQNC RLLNVIPELS SLQLKPMLHL 240 PPDTLLTPSQ FLEAGNPSNS SASSVNGSIG VELQGSIFPW PELSPQDLEE EPGDLKWSEY 300 LNGAAITSAE IRCSYGVGKG GEELDPWH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09540.1 | 6e-82 | MYB family protein |