PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV82947.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 384aa MW: 42413.8 Da PI: 5.0425

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV82947.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43	1.1e-13	100	145	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W +eEde+l ++v+++G+++W++I ++ + Rt+k+c++rw + RWV82947.1 100 KGTWMAEEDEILMEYVRKHGPRDWSSIRSKGLLARTGKSCRLRWVN 145 799**********************888779*********87 PP
2	Myb_DNA-binding	34.7	4.1e-11	149	186	6	45
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++ + +d+ +++G++ W++Ia +++ gRt++++k++w RWV82947.1 149 PDLKTIVLDLQAKFGNK-WARIATYLP-GRTDNDVKNFWS 186 67888999*******.*****.*********5 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MHAYIRLVVV VMDNERRYSL EGGGGGGVPD ITTLGVSSDD RGQTCVRFDI LFPLSLNVVK 60 PMQGAKPATS SSNGSVGSSS SRSSGRRSSR RDEGGMAIRK GTWMAEEDEI LMEYVRKHGP 120 RDWSSIRSKG LLARTGKSCR LRWVNKLKPD LKTIVLDLQA KFGNKWARIA TYLPGRTDND 180 VKNFWSTRQK RLARISRSSL PPRSSKNDKE LTAVSSYEAP PNMEDTCIDL VLLEEGSSNV 240 QCCNAFYVDN QYAMSMAPSP CNLGLGTALP PLLEPATEEE LLRLPNTSIP PQPQPQPPQQ 300 QHIGPLPQPP LDYLDHFTGE EICFPEDFGC QESSPCMQFL YDGPPFARED EQPPAPDSLF 360 DDLPSDLFDY LEPPPPPPPT SSAS

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MHAYIRLVVV VMDNERRYSL EGGGGGGVPD ITTLGVSSDD RGQTCVRFDI LFPLSLNVVK  60
PMQGAKPATS SSNGSVGSSS SRSSGRRSSR RDEGGMAIRK GTWMAEEDEI LMEYVRKHGP  120
RDWSSIRSKG LLARTGKSCR LRWVNKLKPD LKTIVLDLQA KFGNKWARIA TYLPGRTDND  180
VKNFWSTRQK RLARISRSSL PPRSSKNDKE LTAVSSYEAP PNMEDTCIDL VLLEEGSSNV  240
QCCNAFYVDN QYAMSMAPSP CNLGLGTALP PLLEPATEEE LLRLPNTSIP PQPQPQPPQQ  300
QHIGPLPQPP LDYLDHFTGE EICFPEDFGC QESSPCMQFL YDGPPFARED EQPPAPDSLF  360
DDLPSDLFDY LEPPPPPPPT SSAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	1e-47	MYB family protein