PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV82292.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WOX | ||||||||
Protein Properties | Length: 218aa MW: 24063.1 Da PI: 9.2511 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.5 | 3.6e-21 | 88 | 147 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+e+Le+l++ r+p+ ++e++A++l +++ ++V++WFqN++a++++ RWV82292.1 88 TRWNPTPEQIEVLEALYQGgMRTPNPPQIERIAAELgkygRIEGKNVFYWFQNHKARDRQ 147 7*****************99*************************************996 PP | |||||||
2 | Wus_type_Homeobox | 113.7 | 9.3e-37 | 88 | 148 | 4 | 64 |
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 tRW+PtpeQi++Le+ly+ G+rtPn +i+ri+aeL +yG+ie+kNVfyWFQN+kaR+rqk RWV82292.1 88 TRWNPTPEQIEVLEALYQGGMRTPNPPQIERIAAELGKYGRIEGKNVFYWFQNHKARDRQK 148 8***********************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MKVQQLMSGF WEQLPSSSSS SSSSSSLSSL TTDKSKRLRP LAPKLGSTAA ASTADTMNSP 60 LLKSFDCLVT SKSTSGNINA SLMQSGGTRW NPTPEQIEVL EALYQGGMRT PNPPQIERIA 120 AELGKYGRIE GKNVFYWFQN HKARDRQKLK RSSLLALATN TASDLSGLKE EETRECHDGS 180 CKRKCRSWGR HELDVEGSGL GEQTLELFPL RPEWKHAD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46480.1 | 3e-43 | WOX family protein |