PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV81948.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 343aa MW: 39836.5 Da PI: 10.0663

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV81948.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.4	9.1e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW eEd +l +v+q+G++ W++++++m+ ++R +k+c +rw +yl RWV81948.1 4 RQRWRSEEDAILCAYVTQYGPREWHLVSQRMNapLHRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	32.4	2.1e-10	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ +++ +++G++ Wk+Ia++++ gRt+k + +w + RWV81948.1 59 KGSLTEEEQRVVIRLQAKYGNK-WKRIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MKERQRWRSE EDAILCAYVT QYGPREWHLV SQRMNAPLHR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRVV IRLQAKYGNK WKRIAAEVPG RTAKRLGKWW EVFKEKQQRR QRESSSRSAV 120 CSIEPSKYDQ ILENFAEKLV KDHHHITPLL MATPLLPPWL SNNNGAHRPP SPSVALTLSP 180 STMPPAPARW PPSERAADHS LGSSRLQHGM APGFTAVDGR MVSDLVECCK EIEEGHRAWM 240 SHKKEAAWRL QRVELQLEAE KANKRREKME ETEAKIRALR EEQQAALDRI EAEYREQILG 300 LRRDAEAKEQ KLAEQWASKH MRLSKFLEQC GCRQWPSAEM NGR

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MKERQRWRSE EDAILCAYVT QYGPREWHLV SQRMNAPLHR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRVV IRLQAKYGNK WKRIAAEVPG RTAKRLGKWW EVFKEKQQRR QRESSSRSAV  120
CSIEPSKYDQ ILENFAEKLV KDHHHITPLL MATPLLPPWL SNNNGAHRPP SPSVALTLSP  180
STMPPAPARW PPSERAADHS LGSSRLQHGM APGFTAVDGR MVSDLVECCK EIEEGHRAWM  240
SHKKEAAWRL QRVELQLEAE KANKRREKME ETEAKIRALR EEQQAALDRI EAEYREQILG  300
LRRDAEAKEQ KLAEQWASKH MRLSKFLEQC GCRQWPSAEM NGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-131	MYB family protein