PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV81716.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 424aa MW: 46850.1 Da PI: 6.8385 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 47.2 | 3.7e-15 | 1 | 39 | 18 | 56 |
HHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 18 lFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +F+++++p++++r eL+++l L+ rqVk+WFqNrR+++k RWV81716.1 1 MFKECPHPDEKQRLELSRRLCLESRQVKFWFQNRRTQMK 39 69**********************************998 PP | |||||||
2 | START | 26.5 | 1.4e-09 | 222 | 299 | 1 | 69 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCG CS START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddk 69 ela++a++el+++a+ eep+W+ s + +n++ ++++f + + + ea+r++++v +++ lve+l+d++ RWV81716.1 222 ELALAAMEELMSMAQMEEPLWFPCSqdgpKALNYEQYRRTFRPIPGispvgSVPEASRETRIVSITSVALVETLMDSA 299 5899*********************99*9************8855599999999*********************987 PP | |||||||
3 | START | 114.8 | 1.3e-36 | 298 | 407 | 95 | 206 |
EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHH CS START 95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaeg 192 +ael +lsplv+ R++ f+R+++q+ +g+w++vdv+vd + s++ +++lpSg+l++++++g+skvtwveh+++++ ++h l+r+l++sg+a+g RWV81716.1 298 SAELHVLSPLVAvREVSFLRFCKQHAEGVWAVVDVAVDGIRADL---SSASCRRLPSGCLVQDMPDGYSKVTWVEHAEYDEGQVHHLYRPLLRSGQAFG 393 68999**********************************99965...6777779********************************************* PP HHHHHHHTXXXXXX CS START 193 aktwvatlqrqcek 206 a +wvatlqrqce+ RWV81716.1 394 AGRWVATLQRQCEC 407 ************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 424 aa Download sequence |
MFKECPHPDE KQRLELSRRL CLESRQVKFW FQNRRTQMKV GTLRDTQILS LLLGLRFPLE 60 FMLVDGLQTQ LERCENALLR QMNEKLRAEN MAIREATQSP ACKNCGGPAM LGNVSMERQQ 120 LRLENARLKE ELDRLCALAG KFLGKSASSL VGHISPTMPS SVLELGVGNN VFAGFNSVVA 180 PTISAVPDYL PVFSSNPLGA VAPTMGKNME ALLGSGRSML LELALAAMEE LMSMAQMEEP 240 LWFPCSQDGP KALNYEQYRR TFRPIPGISP VGSVPEASRE TRIVSITSVA LVETLMDSAE 300 LHVLSPLVAV REVSFLRFCK QHAEGVWAVV DVAVDGIRAD LSSASCRRLP SGCLVQDMPD 360 GYSKVTWVEH AEYDEGQVHH LYRPLLRSGQ AFGAGRWVAT LQRQCECLAT LVSPTAVARD 420 ETGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.2 | 1e-112 | HD-ZIP family protein |