PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV81273.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 416aa MW: 45252.8 Da PI: 9.5764

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV81273.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.4	1.4e-17	168	213	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l ++v+++G ++W++I++ ++ gR++k+c++rw + RWV81273.1 168 KGSWSPEEDAALTRLVERHGARNWSLISAGIP-GRSGKSCRLRWCNQ 213 799***************************.*********985 PP
2	Myb_DNA-binding	50.3	5.3e-16	222	264	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed ++ a+ ++G++ W+tIar ++ gRt++ +k++w++ RWV81273.1 222 PFTPAEDATILAAHDRYGNK-WATIARLLP-GRTDNAIKNHWNST 264 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MASTATKIEP HLLRREQRSC YVLRIPHRCL PASELRYASI AAGHDSGSVV PSLTSELFRA 60 GTPTGPSPLD CASLEIGFWT LTQPMGFWIL ALTSPNVKFQ PHLNRKQTNH PTNRTSSLPS 120 PSIFVSDSLD SFLSLRIRRR SRGLRGKEEQ SDEMVMVEES DKGEQRVKGS WSPEEDAALT 180 RLVERHGARN WSLISAGIPG RSGKSCRLRW CNQLSPSVHH RPFTPAEDAT ILAAHDRYGN 240 KWATIARLLP GRTDNAIKNH WNSTLRRRRR ATPVVPAPAS SPSPSPSPSP LPLSSSSPIT 300 TAAASSVEPD HSDAGSARKR QRSNEDANGG GCSSLAADPT TSLSLSLPGD GGGAETRSDG 360 PLGDVERLRD MCLVSIMRQM IAEEVRSYID KLRSPGGVDD TVTIVVKAEP TSDRHN

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MASTATKIEP HLLRREQRSC YVLRIPHRCL PASELRYASI AAGHDSGSVV PSLTSELFRA  60
GTPTGPSPLD CASLEIGFWT LTQPMGFWIL ALTSPNVKFQ PHLNRKQTNH PTNRTSSLPS  120
PSIFVSDSLD SFLSLRIRRR SRGLRGKEEQ SDEMVMVEES DKGEQRVKGS WSPEEDAALT  180
RLVERHGARN WSLISAGIPG RSGKSCRLRW CNQLSPSVHH RPFTPAEDAT ILAAHDRYGN  240
KWATIARLLP GRTDNAIKNH WNSTLRRRRR ATPVVPAPAS SPSPSPSPSP LPLSSSSPIT  300
TAAASSVEPD HSDAGSARKR QRSNEDANGG GCSSLAADPT TSLSLSLPGD GGGAETRSDG  360
PLGDVERLRD MCLVSIMRQM IAEEVRSYID KLRSPGGVDD TVTIVVKAEP TSDRHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	1e-49	MYB family protein