PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV80688.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 482aa MW: 50245.2 Da PI: 8.9218

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV80688.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.2	3.4e-39	92	182	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg...k 89 +k+ ++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ + s +ss+s+ s++ + RWV80688.1 92 QAKRCSKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQAEPAIIAATGTGTIPANFStLNISLRSSGSSFSAPaskS 182 578999**************************************************************99976666666666333332220 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MQRFFLLERK FLEKKRGMCW GELSSALDAL SDAHLRCPAA AAAAAAPYYR RSGVDASLAI 60 STAKPDPGGA VGPSSSSPAA EASKKLAVAG TQAKRCSKDR HTKVDGRGRR IRMPAICAAR 120 VFQLTRELGH KTDGETIEWL LQQAEPAIIA ATGTGTIPAN FSTLNISLRS SGSSFSAPAS 180 KSAPLSFHAL ALAHHRPDFE LVTDPGAAAM LGFHQLHHHP HQHQLLSADQ IGEGLQGGVG 240 SGESTDTYLR KRFRADLFKD EQQTPSQQQE GGGGAGPSSP SSVSKSVRAG SGLQLQQRSQ 300 QQDAAAAGLT RPPGILPAAA MWAVAPNSAA GGAFWMLPVS AGSAAPAVAA ATGPSEPSIW 360 TFPAMAGQYR GGISGGSTIQ APLQFMSRVN LPGAADFQGG RALPLGSMVL QQPTSGVAAQ 420 HLGLGTSETN LGMLAALNAY NRGGGLSMNS EHHHPMDHHH QAHTHQQQQS ADSDEDNQTS 480 SQ

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MQRFFLLERK FLEKKRGMCW GELSSALDAL SDAHLRCPAA AAAAAAPYYR RSGVDASLAI  60
STAKPDPGGA VGPSSSSPAA EASKKLAVAG TQAKRCSKDR HTKVDGRGRR IRMPAICAAR  120
VFQLTRELGH KTDGETIEWL LQQAEPAIIA ATGTGTIPAN FSTLNISLRS SGSSFSAPAS  180
KSAPLSFHAL ALAHHRPDFE LVTDPGAAAM LGFHQLHHHP HQHQLLSADQ IGEGLQGGVG  240
SGESTDTYLR KRFRADLFKD EQQTPSQQQE GGGGAGPSSP SSVSKSVRAG SGLQLQQRSQ  300
QQDAAAAGLT RPPGILPAAA MWAVAPNSAA GGAFWMLPVS AGSAAPAVAA ATGPSEPSIW  360
TFPAMAGQYR GGISGGSTIQ APLQFMSRVN LPGAADFQGG RALPLGSMVL QQPTSGVAAQ  420
HLGLGTSETN LGMLAALNAY NRGGGLSMNS EHHHPMDHHH QAHTHQQQQS ADSDEDNQTS  480
SQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	1e-46	TCP family protein