PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV80572.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C2H2
Protein Properties Length: 319aa    MW: 35552.4 Da    PI: 8.1243
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV80572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.21.4e-05124143221
                 EETTTTEEESSHHHHHHHHH CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHir 21 
                 +C+ Cgk+Fs++  L  H+r
  RWV80572.1 124 PCTECGKRFSSWKALFGHMR 143
                 5******************8 PP
2zf-C2H210.70.0017253274223
                 EETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                 kC dC++ Fs+   L+ H r H
  RWV80572.1 253 KCDDCSRGFSTGQALEGHKRHH 274
                 788*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MVSKPLPLPS FPLFRMQRTI MDSSSSINLP YLPPPPPPPP YQPLHQPTPP PLQHLDENSA  60
RPLPPQPKYK PSPGFVPHGR DPSFQHNLGP FSFPPSSTMA KPKPRRKPDL AAATTAATKA  120
TTPPCTECGK RFSSWKALFG HMRCHPERQW RGINPPPHLR RPLPLASPTP EEHFTDEEYE  180
VAASLILLSR GPHRDISALC RVEPERADAM RPFSFPQPQQ TSGGVLVGSE DACRSWKRAW  240
EEGEATRCYH KCKCDDCSRG FSTGQALEGH KRHHWEREEE IVVGCSSSGN YVLDLNLPPP  300
SLENNEANPS TVLDLMLGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.13e-28C2H2 family protein