PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV80521.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 212aa MW: 24052.3 Da PI: 7.783 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 32.1 | 2.2e-10 | 75 | 115 | 20 | 59 |
S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 20 fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 rsYYrCt++ gC++k +v++++ p+++ +t +g+H+++ RWV80521.1 75 RYRSYYRCTYSedqGCTAKMQVQQQT--PSLFLVTHTGRHTCK 115 569*******98999********999..*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MEHAFDLSKK LQSLIELGSC SDRLKELVRV LKDDLLQIVG SRKNDVKPQK KCMASLDVPI 60 RIDRRRILPV FACPRYRSYY RCTYSEDQGC TAKMQVQQQT PSLFLVTHTG RHTCKASSSR 120 TDDDDTVNSS ASHITEITPP VEPFLLRFDS GDQYKMEENK SYVRKDMIQT WFGKLESADL 180 TFHESIDSSS TIGGIDSLSS VCVGHGFLSI RF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66550.2 | 1e-10 | WRKY family protein |