PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AT1G66550.2 | ||||||||
Common Name | ATWRKY67, WRKY67 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | WRKY | ||||||||
Protein Properties | Length: 249aa MW: 28362.9 Da PI: 6.5004 | ||||||||
Description | WRKY DNA-binding protein 67 | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 70.4 | 2.6e-22 | 103 | 163 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK++k s + r YYrCt+a +C+++k+v++ +++p v +tY g+H ++ AT1G66550.2 103 NDGFTWRKYGQKTIKASAHKRCYYRCTYAkdqNCNATKRVQKIKDNPPVYRTTYLGKHVCK 163 7***************************99999*************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.0E-23 | 94 | 163 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.44E-21 | 99 | 163 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.1E-32 | 102 | 164 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.8E-22 | 103 | 163 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 18.797 | 103 | 160 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MVSNIDHKAM EALLRGQGCA NNLKILLENG EISSVSTEPL IHTILDSFSL ALSFMDSPNH 60 PPYHESSSHN MASHMSRRSS KQKLCVAEGL VNYNHDSRTM CPNDGFTWRK YGQKTIKASA 120 HKRCYYRCTY AKDQNCNATK RVQKIKDNPP VYRTTYLGKH VCKAFAVHDD TYSSTMIRFD 180 QVVPEPIMPQ LTTIDHQVIT VEENSAEHIM NQECDINDYL VDDDPFWASQ FPPFPSSDTM 240 FLENISAFD |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 9e-17 | 103 | 163 | 9 | 69 | OsWRKY45 |
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Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
Genevisible | 256364_at | 0.0 | ||||
Expression Atlas | AT1G66550 | - | ||||
AtGenExpress | AT1G66550 | - | ||||
ATTED-II | AT1G66550 | - |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
TAIR | member of WRKY Transcription Factor; Group III | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AT1G66550.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
T-DNA Express | AT1G66550 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AB493521 | 0.0 | AB493521.1 Arabidopsis thaliana At1g66550 mRNA for hypothetical protein, partial cds, clone: RAAt1g66550. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001117559.1 | 0.0 | WRKY DNA-binding protein 67 | ||||
Swissprot | Q93WV7 | 0.0 | WRK67_ARATH; Probable WRKY transcription factor 67 | ||||
TrEMBL | C0SV18 | 0.0 | C0SV18_ARATH; WRKY DNA-binding protein 67 (Fragment) | ||||
STRING | AT1G66550.1 | 0.0 | (Arabidopsis thaliana) |
Link Out ? help Back to Top | |
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Phytozome | AT1G66550.2 |
Entrez Gene | 842973 |
iHOP | AT1G66550 |
wikigenes | AT1G66550 |