PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV80120.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

CO-like

Protein Properties

Length: 336aa MW: 35754.3 Da PI: 6.309

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV80120.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.3	1.1e-06	20	59	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......H 37 + C+ + ++ l+C+ + +lC+ C + H g H RWV80120.1 20 KPCDSCRASPALLYCRADAAYLCRVCDGHVH-GanglassH 59 57*************************9999.435566666 PP
2	zf-B_box	24.2	6.7e-08	61	106	2	41
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvp 41 +++ C+ +e+ ++ C+ + lC+ C +H + H++ p RWV80120.1 61 RAWLCEVCENAPAAVTCKADAAALCAACDADIH-SvnplarrHERLP 106 6789*****************************.4477777788776 PP
3	CCT	65.7	1.4e-22	261	303	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 Rea+l+RY+eKrk R+F+K+irY+sRKa+Ae RpR+KGrF+k+ RWV80120.1 261 REARLMRYREKRKCRRFQKTIRYASRKAYAEARPRIKGRFAKR 303 9****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MAGEAGEVKK RGASLGVASK PCDSCRASPA LLYCRADAAY LCRVCDGHVH GANGLASSHQ 60 RAWLCEVCEN APAAVTCKAD AAALCAACDA DIHSVNPLAR RHERLPLLPF LGPAPKSLTT 120 AAATRRGGGG SFLFRSSSDE EAEAEANSSL LLPQEAPVLR SAAEFFFSDA DAYLDLDYGL 180 PLDDIKTVAE PDPPSLLASD GGYFDLNIAG SKPESDHSLC HSVFSTSAIH VSSSEAAVVP 240 EVSQASVVGI PCDPAATQAD REARLMRYRE KRKCRRFQKT IRYASRKAYA EARPRIKGRF 300 AKRLEVEAEV GRIYSSGAEA VAALMAEDDY GVVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24790.2	1e-28	DBB family protein