PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV79802.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 260aa MW: 27670.8 Da PI: 6.927 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.6 | 1.2e-17 | 15 | 60 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W +eEd l ++v+q+G+++W++I++ ++ gR++k+c++rw + RWV79802.1 15 KGSWNPEEDAVLMRLVEQHGPRNWTLISASIP-GRSGKSCRLRWCNQ 60 799*****************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 57 | 4.5e-18 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T+ Ede +v a+ ++G++ W+tIar ++ gRt++ +k++w++ RWV79802.1 67 RRPFTPAEDETIVAAHSLYGNK-WATIARLLP-GRTDNAVKNHWNST 111 679*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MAVVKGRGVG VQPVKGSWNP EEDAVLMRLV EQHGPRNWTL ISASIPGRSG KSCRLRWCNQ 60 LSPTVHRRPF TPAEDETIVA AHSLYGNKWA TIARLLPGRT DNAVKNHWNS TLRRRLQAAA 120 GAVDASASER PVPSSPMQLD AAAKAPVAAD SEEPGESDSG SQSRKRPCLR DDDATDRSAA 180 GSYPVTSLTL GQPGEGDGTD GGGERRLWEE PTTGMCLLAI MREMIVEEVR SSMNQLTSGG 240 ASGGGTSIII RTDSASNGQD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 2e-53 | MYB family protein |