PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV79473.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ERF

Protein Properties

Length: 634aa MW: 69628.9 Da PI: 9.23

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV79473.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	58.7	1.4e-18	401	451	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae Aa a+++ + kl+ge RWV79473.1 401 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEAAALAYDREAFKLRGE 451 59****9.******965...5************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
KHRGPVSSVK PWTVNGAEAK AHIVTVIAPF CWRRKQGRDG DETDETTDSK RRTSWRYPDG 60 RDLKVHAYGP WLAHNTPRLG DSFLSSDPRE PLLAPFGEVR RTQRLAHNPV CYDSSTSSSS 120 SSSSAYKCHF GMLRIRFDHR IGSHPNPHPP NRSSSPAVRS PPNQCRHFFQ LQIPSILLAF 180 IKNRAGGPSV CAAGAMEDSE KNGGSRGRRQ KGKVQGVLPE STPRGPPLVV DEAASESLWP 240 LKKMTNPDWF PCSPSCSSNS TTPASSRRPF ASATPIFPFA CEDSLPAPLL PALGASPFPR 300 QEQREQQMIS FDRSRRHQTG ACPPSPSFMT EGAAAMDRQQ QLQQQRYQER LLKHWSEALN 360 LSPRGNLAMM SHLARRRSLA SLYPGLFRSA MLPPAPAPAK LYRGVRQRHW GKWVAEIRLP 420 KNRTRLWLGT FDTAEAAALA YDREAFKLRG ENARLNFPNL FLGKGGGGGS RDVASCFSSS 480 SSAPTTPEEA KQHQQDEPRH PSQLEAQFNT PAPATAETTV DGSMSSVADS PSGMHEPAKL 540 GAMVTTPQPT EMVWGDADEA WFSTWGPGSS VWDDVDGANS LLLQSRLTTI AESDMDYSDP 600 AASTTTTAYQ ETDTPAASPS SAPPHPPSWF MWKE

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

KHRGPVSSVK PWTVNGAEAK AHIVTVIAPF CWRRKQGRDG DETDETTDSK RRTSWRYPDG  60
RDLKVHAYGP WLAHNTPRLG DSFLSSDPRE PLLAPFGEVR RTQRLAHNPV CYDSSTSSSS  120
SSSSAYKCHF GMLRIRFDHR IGSHPNPHPP NRSSSPAVRS PPNQCRHFFQ LQIPSILLAF  180
IKNRAGGPSV CAAGAMEDSE KNGGSRGRRQ KGKVQGVLPE STPRGPPLVV DEAASESLWP  240
LKKMTNPDWF PCSPSCSSNS TTPASSRRPF ASATPIFPFA CEDSLPAPLL PALGASPFPR  300
QEQREQQMIS FDRSRRHQTG ACPPSPSFMT EGAAAMDRQQ QLQQQRYQER LLKHWSEALN  360
LSPRGNLAMM SHLARRRSLA SLYPGLFRSA MLPPAPAPAK LYRGVRQRHW GKWVAEIRLP  420
KNRTRLWLGT FDTAEAAALA YDREAFKLRG ENARLNFPNL FLGKGGGGGS RDVASCFSSS  480
SSAPTTPEEA KQHQQDEPRH PSQLEAQFNT PAPATAETTV DGSMSSVADS PSGMHEPAKL  540
GAMVTTPQPT EMVWGDADEA WFSTWGPGSS VWDDVDGANS LLLQSRLTTI AESDMDYSDP  600
AASTTTTAYQ ETDTPAASPS SAPPHPPSWF MWKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20880.1	3e-26	ERF family protein