PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV79190.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 284aa MW: 32056.9 Da PI: 6.7918

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV79190.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.6	2.9e-13	14	66	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqkyl 48 +g W++eEde+lv+ ++++G g+W++++r g +R+ + ++rw +yl RWV79190.1 14 KGLWSPEEDEKLVKHITEHGHGCWSSVPRQAGtatlpPTRSTHHEQLRWINYL 66 678**********************************************9997 PP
2	Myb_DNA-binding	46.2	1e-14	72	116	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg ++eE+ l++++++ lG++ W+ Ia++++ gRt++++k+ w++y RWV79190.1 72 RGTLSEEEESLIIELHAVLGNR-WSQIAARLP-GRTDNEIKNSWNTY 116 78889***************.*****.**********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MGRHSCCYKQ KVRKGLWSPE EDEKLVKHIT EHGHGCWSSV PRQAGTATLP PTRSTHHEQL 60 RWINYLRPDL KRGTLSEEEE SLIIELHAVL GNRWSQIAAR LPGRTDNEIK NSWNTYIKKK 120 LRQRGIDPNS HQPIGDLKMP TATPENVNRA VTENSMASTR LSVPMAVFSL AQLSFLPDDR 180 PHCSTVIDSS RSNMSKANGV ELQSSCSFDG GILPWSELAP DMDAQLHLEG ESEDLKWSEY 240 LQGVFPTPAA TQTQTQQFTG LGAWHQNQNQ QQQLLLSDIH DKDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	2e-64	MYB family protein