PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV78637.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 257aa MW: 27904.8 Da PI: 6.2556 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.1 | 1.4e-20 | 72 | 122 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g+ RWV78637.1 72 RYRGVRRRP-WGKWAAEIRDP-----HraARVWLGTFDTAEAAARAYDEAALRFRGN 122 59*******.**********7.....338*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MEYERSVMVS ALVHVVAGDR GTEAPVDGGG GQTRWNEGLV NEAASELYVS YGDFGRSSSS 60 ASAGTEQGER IRYRGVRRRP WGKWAAEIRD PHRAARVWLG TFDTAEAAAR AYDEAALRFR 120 GNKAKLNFPE EARLRKAPAA TPEAHMESQP SGRHGASGST VAVAARDYME YSRLLRGEGE 180 YQRMMPPTAP LDGMMYPGAS AASPFTDTSS AFSSFASPPF PPSSPLIYPP ESEQQMDDLQ 240 PPPWSGCSHY PPSSSSH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50080.1 | 2e-16 | ERF family protein |