PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWV78618.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 25876.1 Da PI: 6.9703 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 44.6 | 3.5e-14 | 56 | 106 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr ++ grWv+e+r+p++ + r++lg+f +e+Aa a++ a+ +l+g RWV78618.1 56 PVYHGVR-ERNGGRWVCEVREPRK---KSRIWLGTFQAPEMAALAHDVAAIALRG 106 689***9.7779******999843...6*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 237 aa Download sequence |
KEYKEALEAY DGKNREKGQL VNKLMETGGS TSASRALGPS PKRKAGRKKF RETRHPVYHG 60 VRERNGGRWV CEVREPRKKS RIWLGTFQAP EMAALAHDVA AIALRGGSAQ LNFPDLAGAL 120 PRARSTAPDD VRRAAAEAAE MLRPLKSSPA LLPAVSGAGG SQGREEREEN TATEDAAAPP 180 AAVSVDEEEL FNMPGLMEDM ARGLLLTPPS LQRRGFDWAS AVEEEQEIDL SPLWNHE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G25480.1 | 4e-36 | ERF family protein |