PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV78247.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SRS

Protein Properties

Length: 313aa MW: 33929.2 Da PI: 11.2006

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV78247.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	124.8	1e-38	88	194	2	100
DUF702 2 rsgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa...............aeaaskrkrelkskkqsa 85 +sg++sCqdCGnqakkdC h+RCRtCCksrgf+C thvkstWvpaakrrerqqqlaa+++ ++++ ++ +++ ++ RWV78247.1 88 GSGGMSCQDCGNQAKKDCPHMRCRTCCKSRGFQCPTHVKSTWVPAAKRRERQQQLAASAAAVQQDQrhrgggrsaaegssgGSEP-------SKRPREI 179 5789**************************************************9998777666665677776644333333333.......4445555 PP DUF702 86 lsstklssaeskkel 100 +++t++++a++++++ RWV78247.1 180 TACTRIPNATATTTT 194 566666665554433 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MAGFFLGGGG GSQQQRGDQQ AGGIPPTESF FLYGGRGSRG EDVAYTRGFE LWQQHQIQRE 60 HQLYSTAGFP NELPSVASRP TRGSLEGGSG GMSCQDCGNQ AKKDCPHMRC RTCCKSRGFQ 120 CPTHVKSTWV PAAKRRERQQ QLAASAAAVQ QDQRHRGGGR SAAEGSSGGS EPSKRPREIT 180 ACTRIPNATA TTTTYGTTIS YYSLAAPNTV VVMRTTISRI LRSAPFSLRL PRCPPHVLQF 240 TLSFLAQQKT RSAPSYLTGC CRRKPGAGEL PAGGERAGDV PVRAREPRGR TGRRVRVPGR 300 RQHQRPCLQG NTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75520.1	1e-25	SRS family protein