PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV77979.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 341aa MW: 38361.1 Da PI: 9.2033

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV77979.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.1	1.8e-17	39	86	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++q+G g+W+++++ g+ R+ k+c++rw +yl RWV77979.1 39 KGPWTPEEDIILVSYIQQHGAGNWRSVPSNTGLMRCSKSCRLRWTNYL 86 79********************************************97 PP
2	Myb_DNA-binding	41	4.3e-13	92	149	1	48
TSSS-HHHHHHHHHHHHHTTTT...........-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...........tWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+ ++++++ +lG +W++Ia +++ +Rt++++k++w+++l RWV77979.1 92 RGNFTPHEEGIIIHLHFELGFSnlvplrfylqvRWAAIATYLP-RRTDNDIKNYWNTHL 149 89***************************************.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
GAEQKREEER RRRRRRRHRG NSKSSMGRSP CCEKVGIKKG PWTPEEDIIL VSYIQQHGAG 60 NWRSVPSNTG LMRCSKSCRL RWTNYLRPGI KRGNFTPHEE GIIIHLHFEL GFSNLVPLRF 120 YLQVRWAAIA TYLPRRTDND IKNYWNTHLK KKINKSHTAT DGYKLSSGTS PSCHDYMPEG 180 YDTETRKQDI TFPLPSMRLT PSVYACNTGN ISRLLEGWGQ KNTQGKLQER AIPDDSHSSN 240 NDATAAASIR DKSRAAGDQG RSTAMTHEDL GTLPPFENVS GGSWEKTAAG KAGFGDAEAK 300 QGGENHQPPL SLLEKWLFDE ASGHVDEMMD LPVDCCSLPM F

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	6	15	REEERRRRRR
2	10	15	RRRRRR
3	10	16	RRRRRRR
4	10	17	RRRRRRRR
5	11	16	RRRRRR
6	11	17	RRRRRRR
7	11	18	RRRRRRRR
8	12	17	RRRRRR
9	12	19	RRRRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08810.1	1e-83	MYB family protein