PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022777347.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Protein Properties

Length: 442aa MW: 50431.5 Da PI: 6.8551

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022777347.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.7	1e-18	208	305	3	98
EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 k+l++sdv+++gr+vlpk+ ae + ++ +e+++l+++d s+++W++k+++ ++ks++yvl+ ++ +Fvk+ngL+ gD+++++ ++++++l XP_022777347.1 208 KELKNSDVGSLGRIVLPKREAEINlpTLSDKEGIQLMIKDvYSNQVWTLKYKFwtNNKSRMYVLE-NTGDFVKQNGLEIGDSLTLY--EDESKNL 299 899****************888555568899***7888***99888888889999.******************..6689999 PP EEEEE- CS B3 93 vvkvfr 98 ++++++ XP_022777347.1 300 YFSILK 305 999976 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MDNSYIPFSP TTTTTTNTTL RQPNMGWSQN LEFSIYEPMN SKNFSSTPLT TASNSQFHHP 60 PQFMAPYQSL QPPYRHPIEQ AGQSLPYPVY PFFMGRNGIE FGVCSSNHAS NGVQGSCFIQ 120 TDGLSKEQER RILDPYRTKV ARIKRKLARQ RSLSLQRNAS SEASTQVDAR RLTNSGADTK 180 VKNNNDTKRD LYKFCTTENK RLRVLLSKEL KNSDVGSLGR IVLPKREAEI NLPTLSDKEG 240 IQLMIKDVYS NQVWTLKYKF WTNNKSRMYV LENTGDFVKQ NGLEIGDSLT LYEDESKNLY 300 FSILKVERVA VEPSKGQHSD NENNNHMYVP FTCQSRDEED TSLELLIEQL KHKEQEAPND 360 LMTLPMDAAY SHRLPEEARH LLSDSIVASR ETYSRITTTP LQTSSTLLQG KARSVDDIEI 420 NFDDCYGGLD MLPDVNHYNF SL

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MDNSYIPFSP TTTTTTNTTL RQPNMGWSQN LEFSIYEPMN SKNFSSTPLT TASNSQFHHP  60
PQFMAPYQSL QPPYRHPIEQ AGQSLPYPVY PFFMGRNGIE FGVCSSNHAS NGVQGSCFIQ  120
TDGLSKEQER RILDPYRTKV ARIKRKLARQ RSLSLQRNAS SEASTQVDAR RLTNSGADTK  180
VKNNNDTKRD LYKFCTTENK RLRVLLSKEL KNSDVGSLGR IVLPKREAEI NLPTLSDKEG  240
IQLMIKDVYS NQVWTLKYKF WTNNKSRMYV LENTGDFVKQ NGLEIGDSLT LYEDESKNLY  300
FSILKVERVA VEPSKGQHSD NENNNHMYVP FTCQSRDEED TSLELLIEQL KHKEQEAPND  360
LMTLPMDAAY SHRLPEEARH LLSDSIVASR ETYSRITTTP LQTSSTLLQG KARSVDDIEI  420
NFDDCYGGLD MLPDVNHYNF SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	9e-70	B3 family protein