PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022777188.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ERF | ||||||||
Protein Properties | Length: 242aa MW: 26558.1 Da PI: 4.8585 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.8 | 5.4e-18 | 65 | 113 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g XP_022777188.1 65 YRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFSTPEMAARAHDVAALSIKG 113 9****998.**********843...6**********************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MTEPNHSSSS EAESCSSNNN SNSSSSTSSS SQTCQNLSRR SNHGDAPEDT KAKRPRGSSS 60 KHLAYRGVRM RSWGKWVSEI REPRKKSRIW LGTFSTPEMA ARAHDVAALS IKGDSAILNF 120 PELAQLLPRP VSVMPRDIQA AAAKAASMVH FNTRSSSSSL VSESSSLSES NASEEPEELS 180 EIVQLPNIEG NFDSLFDSQE FILLDSVDGW VYPPQDFYGG FSDQIWATEN LIPGSFETSM 240 WE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 1e-51 | ERF family protein |