PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776520.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 600aa MW: 65415.1 Da PI: 9.8516

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776520.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	71	93	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022776520.1 71 FICEVCNKGFQREQNLQLHRRGH 93 89*******************88 PP
2	zf-C2H2	13.1	0.00029	147	169	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022776520.1 147 WKCEKCSKRYAVQSDWKAHSKTC 169 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MAASSSSGPF FGIREEDQNQ MKQHHSSTPT SSTGPAPPPP PKKRRNQPGT PYPDAEVIAL 60 SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLR QKTTKEVKRK VYLCPEPTCV 120 HHDPSRALGD LTGIKKHYSR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYRCDCGT 180 LFSRRDSFIT HRAFCDALAQ ESARHPPSLN SIGNHLYGSS NMSLGLSDVG TQISSIQDQN 240 NQTGDILRLG GGARSTQFDH LLPPSMGSSS PFRSQQPMVS SAAFFMQESN QNFNQEHQPQ 300 QGLLGDNKSF QGLMQFPNMQ NNTSNNPSAA NLFNLSFLSN SSNTNSINNS NNANTANNLT 360 SSGLLISDHF NNENSGGGTS EASNLFSNNI MGDQITSNIH SLFSSSVQNN KMVPQMSATA 420 LLQKAAQIGS SSSNNNNSAS LLRSFSTSSP SGTKPLNIGG ILVDSTGSNL HELMNSIASA 480 NSSIFGGGSG GVNTYSTGHG QENPYINRSR MEQEKQQQQQ NLNVSVGGSD RLTRDFLGVG 540 QIVRSMSGGG VSQREQQTQQ QQQQQQQQQR MGLSTLGSER NTNITAPTGQ RSFEGGGNFQ

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MAASSSSGPF FGIREEDQNQ MKQHHSSTPT SSTGPAPPPP PKKRRNQPGT PYPDAEVIAL  60
SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLR QKTTKEVKRK VYLCPEPTCV  120
HHDPSRALGD LTGIKKHYSR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYRCDCGT  180
LFSRRDSFIT HRAFCDALAQ ESARHPPSLN SIGNHLYGSS NMSLGLSDVG TQISSIQDQN  240
NQTGDILRLG GGARSTQFDH LLPPSMGSSS PFRSQQPMVS SAAFFMQESN QNFNQEHQPQ  300
QGLLGDNKSF QGLMQFPNMQ NNTSNNPSAA NLFNLSFLSN SSNTNSINNS NNANTANNLT  360
SSGLLISDHF NNENSGGGTS EASNLFSNNI MGDQITSNIH SLFSSSVQNN KMVPQMSATA  420
LLQKAAQIGS SSSNNNNSAS LLRSFSTSSP SGTKPLNIGG ILVDSTGSNL HELMNSIASA  480
NSSIFGGGSG GVNTYSTGHG QENPYINRSR MEQEKQQQQQ NLNVSVGGSD RLTRDFLGVG  540
QIVRSMSGGG VSQREQQTQQ QQQQQQQQQR MGLSTLGSER NTNITAPTGQ RSFEGGGNFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-139	C2H2 family protein