PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022776519.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 600aa MW: 65415.1 Da PI: 9.8516 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.1 | 3.1e-05 | 71 | 93 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022776519.1 71 FICEVCNKGFQREQNLQLHRRGH 93 89*******************88 PP | |||||||
2 | zf-C2H2 | 13.1 | 0.00029 | 147 | 169 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022776519.1 147 WKCEKCSKRYAVQSDWKAHSKTC 169 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 600 aa Download sequence |
MAASSSSGPF FGIREEDQNQ MKQHHSSTPT SSTGPAPPPP PKKRRNQPGT PYPDAEVIAL 60 SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLR QKTTKEVKRK VYLCPEPTCV 120 HHDPSRALGD LTGIKKHYSR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYRCDCGT 180 LFSRRDSFIT HRAFCDALAQ ESARHPPSLN SIGNHLYGSS NMSLGLSDVG TQISSIQDQN 240 NQTGDILRLG GGARSTQFDH LLPPSMGSSS PFRSQQPMVS SAAFFMQESN QNFNQEHQPQ 300 QGLLGDNKSF QGLMQFPNMQ NNTSNNPSAA NLFNLSFLSN SSNTNSINNS NNANTANNLT 360 SSGLLISDHF NNENSGGGTS EASNLFSNNI MGDQITSNIH SLFSSSVQNN KMVPQMSATA 420 LLQKAAQIGS SSSNNNNSAS LLRSFSTSSP SGTKPLNIGG ILVDSTGSNL HELMNSIASA 480 NSSIFGGGSG GVNTYSTGHG QENPYINRSR MEQEKQQQQQ NLNVSVGGSD RLTRDFLGVG 540 QIVRSMSGGG VSQREQQTQQ QQQQQQQQQR MGLSTLGSER NTNITAPTGQ RSFEGGGNFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02070.1 | 1e-139 | C2H2 family protein |