PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022775624.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 558aa    MW: 63002.8 Da    PI: 8.0357
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022775624.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS372.36.2e-1141885581374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevsPilkfs 94 
                     lve+L++cAeav+ +d+  a+alL++l+ +a   g+++qR+a++f+++La rla  +  + +  + p +++++ ++e+  al+l +e++P ++f+
  XP_022775624.1 188 LVEQLTACAEAVACRDKMHASALLSELRANALVLGTSFQRVASCFVQGLADRLALlQPLGAVGVVGPVAKARTVTIEKDEALSLVYELCPQIQFG 282
                     689***************************************************9445566667778888888899999**************** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                     h++aN+ Ilea+ege+ vH++D++++     G QW +L+q+L  R+++pp +lRiTgvg       e+l+++g+ L+++A++l+++fef+v v++
  XP_022775624.1 283 HFVANESILEAFEGESFVHVVDLGMTlglaRGHQWRNLMQSLVHRAGQPPkRLRITGVGT----CPERLQAIGDDLEHYAKSLKLNFEFSV-VES 372
                     **********************98762222567*************777779********....**************************9.7** PP

            GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
                     +le+l++e+ +++ +Eal++n++lqlh +++es    +   +vL+ + +lsPk++++veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ +
  XP_022775624.1 373 NLENLKPEDVKTSDEEALVINSILQLHCVVKESRGALN---SVLQKLHKLSPKLLILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYD 464
                     ******************************88877777...8***************************************************** PP

            GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                      +r+k+E++++++ei n+v+ceg +r+erhe++ +Wr+r+++aGF+pvp++  + +qak  l kvk  +gy++ e++g+lvlgWk+++++++S+W
  XP_022775624.1 465 TKRAKMEQFYFAEEINNIVSCEGPARFERHERVDQWRRRMSRAGFQPVPIK--MITQAKQWLGKVKaCEGYTIVEDKGCLVLGWKSKSIIAASCW 557
                     *************************************************96..689*************************************** PP

            GRAS 374 r 374
                     +
  XP_022775624.1 558 K 558
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 558 aa     Download sequence    
MTGRKYSIAL CLTKEIQHLK LIFLCTLFRF WIKCMTSKYS LNKEAHINSH CKQIVLQRIS  60
AMAPGPQWRP QLYGDDKSNE AMSLDLNLPG VQNYSLKCPI DRKFRQIFYE TRNHKRSKLE  120
HPMDESLGSN GNSNCSTTSL PRLLFRDHVW TYMQRYLAIE AMEEAAVAML GGEENESKEE  180
EGGEGMKLVE QLTACAEAVA CRDKMHASAL LSELRANALV LGTSFQRVAS CFVQGLADRL  240
ALLQPLGAVG VVGPVAKART VTIEKDEALS LVYELCPQIQ FGHFVANESI LEAFEGESFV  300
HVVDLGMTLG LARGHQWRNL MQSLVHRAGQ PPKRLRITGV GTCPERLQAI GDDLEHYAKS  360
LKLNFEFSVV ESNLENLKPE DVKTSDEEAL VINSILQLHC VVKESRGALN SVLQKLHKLS  420
PKLLILVEQD SSHNGPFFLG RFMEALHYYS AIFDSLDAML PKYDTKRAKM EQFYFAEEIN  480
NIVSCEGPAR FERHERVDQW RRRMSRAGFQ PVPIKMITQA KQWLGKVKAC EGYTIVEDKG  540
CLVLGWKSKS IIAASCWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.14e-73GRAS family protein