PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022775071.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 279aa    MW: 31300.2 Da    PI: 8.5663
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022775071.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.21.4e-18135189256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++keq   Lee F+++++++ ++++ LA++l+L  rqV vWFqNrRa+ k
  XP_022775071.1 135 RKKLRLSKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTK 189
                     788899***********************************************98 PP
2HD-ZIP_I/II125.13.2e-40135224191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rlskeq++lLEesF+++++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+een+rL++e +eL+ +l
  XP_022775071.1 135 RKKLRLSKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTEENRRLQRELQELK-AL 224
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MGLDDACNTG LVLRLGFSST LETPSKANNQ TPKNSSCLKF EQTATAATSF EPFLTLGLSG  60
ESYQVTASKK IDGYLHRHEE PVAGDLYRQA SSHSAISSFS SGRVKRERDL SSEEVEVEKN  120
SSRISDEDED GVNARKKLRL SKEQSALLEE SFKQHSTLNP KQKQALARQL NLRPRQVEVW  180
FQNRRARTKL KQTEVDCEFL KKCCETLTEE NRRLQRELQE LKALKLAQPF YMHMPAATLT  240
MCPSCERIGG VGDGNSKNPF SMASKPHFYN PFTNPSAAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1184192RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.17e-90HD-ZIP family protein