PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022773901.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 233aa MW: 26791.5 Da PI: 9.8404 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 81.1 | 7.1e-26 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr+g++KKA+EL +LCdaev ++ifsstgk ye++s XP_022773901.1 10 RIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSTGKHYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 81.7 | 1.6e-27 | 81 | 170 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++ + +q+e+a L+++++nLq+++R+l+Ge L+ Ls+k+Lq+Le+qLe s++ +R kK++ll+++i+el ++ + +++en +L kk+ XP_022773901.1 81 NPTSEVKFWQREAAILRQQLHNLQENHRKLMGEHLSGLSVKDLQNLENQLEMSMRGVRMKKEQLLTDEIQELSRRGNLIHQENVELYKKV 170 567889*********************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRKGLIK KAKELAILCD AEVGLVIFSS TGKHYEFASS 60 SMKSVIERYS SMKEEHQQLL NPTSEVKFWQ REAAILRQQL HNLQENHRKL MGEHLSGLSV 120 KDLQNLENQL EMSMRGVRMK KEQLLTDEIQ ELSRRGNLIH QENVELYKKV NLIQKENMEL 180 YKKVYGTRDV NTSGGNALNS YGFDSGEGSD VPFHLRLSQP EAQTCNPPNR DKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 1e-106 | MIKC_MADS family protein |