PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772347.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 332aa MW: 37308.6 Da PI: 9.4138

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772347.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57	4.4e-18	18	63	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+q+G +W++Ia++++ gR++k+c++rw++ XP_022772347.1 18 RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ-GRSGKSCRLRWFNQ 63 899***************************.*********996 PP
2	Myb_DNA-binding	56.4	6.7e-18	70	113	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+ +l+ a++ +G++ W++Iar ++ gRt++ +k++w+ XP_022772347.1 70 RRPFTEEEEGRLLAAHHIHGNK-WALIARLFP-GRTDNAVKNHWHV 113 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MEDSGAASSY DVKSTCPRGH WRPAEDEKLR QLVEQYGAQN WNSIAEKLQG RSGKSCRLRW 60 FNQLDPRINR RPFTEEEEGR LLAAHHIHGN KWALIARLFP GRTDNAVKNH WHVIMARKQR 120 EQSKLCGKSS FQDGLSVSKL SSTGFTPRKA RCQEAFSSGI GDNRFFEFQN LSKERVFSVS 180 PSSISSPSGT FTSSIMMASN NSSSVEFSRT DGKDYLLPSG SSYYSMESSK FLDQSLYKYH 240 SNASAYCSSF RNSSAFGLPN YRTVVPSPFG YIKLGHNYET NNGVMKELMS FTDNAPKLAN 300 IRVSNSQQEQ EDESIKTKDV PFIDFLGVGI SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	7e-67	MYB family protein