PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022771498.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NAC | ||||||||
Protein Properties | Length: 467aa MW: 53360.1 Da PI: 5.24 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 116.1 | 3.6e-36 | 5 | 134 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 +GfrFhPtdeel+ eyL+ k+ + + + +vi+ev di+++ePw+Lp ++++++++ wyf + + ky+++k +r+t gyWk tg+ +++++ XP_022771498.1 5 KGFRFHPTDEELI-EYLHIKTFDPDSVV-QVIAEVqDICESEPWELPgrSTLQTGDRLWYFMYPPKYKYRNSKLISRTTLVGYWKPTGNARKIIN 97 7************.9*****99999777.8999999***********6448888999*************************************9 PP NAM 95 k.kgelvglkktLvfykg..rapkgektdWvmheyrl 128 +ge++g kktLvf+kg ++++ ++t Wvmhey+l XP_022771498.1 98 PdTGEEIGSKKTLVFHKGqyNDKNKNRTPWVMHEYEL 134 978999**********88546677789********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 467 aa Download sequence |
MNFVKGFRFH PTDEELIEYL HIKTFDPDSV VQVIAEVQDI CESEPWELPG RSTLQTGDRL 60 WYFMYPPKYK YRNSKLISRT TLVGYWKPTG NARKIINPDT GEEIGSKKTL VFHKGQYNDK 120 NKNRTPWVMH EYELKVTPKA TDFDQKTFKL CKLKKKADVS SGEASESTQH SLSNVENHVA 180 NNVTSEVRCF MRIYFFFQSV FHVGYDEHVH NYCLFFYYQD PLDPNGSYEP EASNDHDGVH 240 NHCSSVETYA GKISNQHNMV NEGENSNLSS NVVNHVAEDA VLKEPLYLKE VSTEGSGPKD 300 NRRVQNLYST IEQNDKSSNS VLTNHDETVP TEAEGFKVPF NLEHLADGDL IPTELLYDLG 360 LSLDELSPEP EAANKSNWIQ ERNTQQCSAT YNEDFGLPCI GVMMESSNSM EKSTKRPRLQ 420 YDGLHHHVET GEAQPWGEEY LCKSQSIQTD SCNRRVTTQI GGSITYQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03200.1 | 8e-29 | NAC family protein |