PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022770406.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 320aa    MW: 35225.8 Da    PI: 6.3555
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022770406.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.81.8e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W +eEde+lv+++k+ G g+W++ ++  g+ R++k+c++rw +yl
   XP_022770406.1 14 KGPWAPEEDEILVNYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding50.54.8e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+eE++l ++++  lG++ W++Ia+ ++ gRt++++k+ w+++l
   XP_022770406.1  67 RGPFTPEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MGRTPCCDRK GLKKGPWAPE EDEILVNYIK KNGHGSWRSL PKLAGLLRCG KSCRLRWTNY  60
LRPDIKRGPF TPEEEKLVIQ LHGILGNRWA AIASQLPGRT DNEIKNLWNT HLKKRLLCMG  120
LDPQTHKPFP PCGPTTAAPT SPTTRHMAQW ESARLEAEAR LSKESLLFSS PPFGKPDSDY  180
FLRLWNSEVG ESFRKLNTED KTACQSPISQ TSSSTKCGSV SVVTVDICPN IAGSSTPANN  240
QIEDIECKSF KSCNEDPPDA SDSSCSNESE DSSDTALQLL LDFPINNDMS FLENVDTFVT  300
SAAMLTETSL ISPSGGYLAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-120MYB family protein