PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022770303.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 204aa MW: 22353.5 Da PI: 8.2206 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 127.5 | 6.3e-40 | 9 | 109 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC+k+C++apyf ++q +++fa+vhk+FGasn +k+l+++p ++r da+ +l+yeA r+rdPvyG+vg+i++lqqq e l+ael XP_022770303.1 9 PCGACKFLRRKCVKGCIFAPYFDSDQgTADFAAVHKVFGASNASKMLQRIPAHKRVDAVVTLCYEALSRVRDPVYGCVGHIFTLQQQAEILQAEL 103 7***********************9988******************************************************************* PP DUF260 95 allkee 100 a+++++ XP_022770303.1 104 AYIQAR 109 *99875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 204 aa Download sequence |
MSANNGGGPC GACKFLRRKC VKGCIFAPYF DSDQGTADFA AVHKVFGASN ASKMLQRIPA 60 HKRVDAVVTL CYEALSRVRD PVYGCVGHIF TLQQQAEILQ AELAYIQARL SALPRLPQMP 120 PFQAQGQCPS PSSLHATSDI GSHLVSSSNM SMHFDPPQPQ HPSIELTSFP NPFDQGMENK 180 ELQALAREFV SRYLHLPAKT SNCY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G00210.1 | 9e-56 | LBD family protein |