PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770021.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 1585aa MW: 179709 Da PI: 9.121

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770021.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00035	1494	1516	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H XP_022770021.1 1494 CPvkGCGKKFFSHKYLVQHRRVH 1516 9999*****************99 PP
2	zf-C2H2	11.7	0.00082	1552	1578	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H XP_022770021.1 1552 YVCAeeGCGQTFRFVSDFSRHKRKtgH 1578 89********************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1585 aa Download sequence
MAASNLSPEP SQEVFSWLKS LPLAPEYRPS LAEFQDPIAY IFKIEKEASQ YGICKIIPPV 60 PPAPKRTAIG NLNRSLVARA AANASSDSKP APTFTTRQQQ IGFCPRKQRP VQKPVWQSGE 120 YYTFQEFEAK AKSFERNYLK RYSKKGSLSA LEVETLFWKA TVDKPFSVEY ANDMPGSAFV 180 PLDSKKSSVG GREAGEGVTV GETPWNMRAV SRAKGSLLRF MKEEIPGVTS PMVYIAMLFS 240 WFAWHVEDHD LHSLNYLHMG AAKTWYGVPR DAAVAFEEVV RVDGYAGEFN PLVTFSTLGE 300 KTTVMSPEVF ICAGVPCCRV PMSIGAKPKS SRLKDKNKSE GETLVKKLFV QNLIQNNDLL 360 HILGKGSSVV LLPKCSSDSS LCSELRVASQ LRTNPRISLG LCNYKEVRES SETLASDEIM 420 LGRSEEIKAV KGFYSVKGKF VTIYEGNRDS SFRGTDYTCR LPTQTLNTNI ERESAVQADA 480 LSDQRLFSCV TCGILCFDCI AVLQPTEQAA RYLMSADCSF FNDWTVGSGL THDGFTAAHG 540 DAITSEQNPC TRRINRSAPN ALYDVPVQSV EYKFQMVDQT NQVVEDTKEG GDTSALGLLA 600 SAYGNSSDSE DHVEPNATVF GDETSSANTS PGRKFQYNGS GFSPGNANRS HTSSLSRLDS 660 EEEAPIHVTD SCSEPGSRRV DIKYRSPQTV DRAVEFETDN LASGRSNSLE DKFRDPITVS 720 HANPSCSPAT HGTEKMRCSK AIAPMENADI PYAPRSDEDS SRMHVFCLEH AVEAEQQLRQ 780 IGGVHVFLLC HPEYPKIEAE AKLVAEELEI DYQWNDILFG DATKDDEERI HSALDSEDAL 840 HGNGDWAVKL GINLFYSANL SRSTLYSKQM PYNCVIYSAF GRKSPASSPT KLNRYGRRSS 900 KQKKVVAGKW CGKVWMSNQV HPFLAQRDPD EQEQERCFHA WATSDENLER KRENVQKAET 960 TKVAKVFNRK RKMRAEIAPS KKVTCIEPQG AVSDDSLDGS SLRQQQRFFR GKQPRLIEKE 1020 EAISYDSLED DSLLLCRNLS RRKQAKFLER EAAESEDEEE DFNAQQHWRN LRGKQGKYFE 1080 EDDVVSGDSL DESSLKQYRR IRRSRQAKFM EVEDAVSDDE QEEISHQLQR RIPRGRQIKS 1140 FERNDAISDY SRADNALKQY RRISKGKHPK FFERDYAMSD DASDDDSQRH LRRIPRGKHM 1200 KRMERDYAFS DDSLEDNPQQ QHRRRSKVAK YTDREVVVSF GPLKGNSHQQ HRKVPRSKRT 1260 KYIEREDAVL SDSPGDSSLQ QLRRIARSKH TKILKREDAV SDDSLDDTSP KQLRKTPRSR 1320 QGKFIERENA VSYDSLEENY HQPNRNLRSR KKKAQTPRQI QQETPQNVKQ GKRRTTKQVV 1380 SQQMKLETPR NRNTKIEQSA RQCNSYGEDE IEGGPSTRLR KRVRKPLKES EAKPKEKKQA 1440 SKKKVKNASN VKTLAGHNTA KVKDEEAEYQ CDMEGCTMSF GLKQELVLHK RNICPVKGCG 1500 KKFFSHKYLV QHRRVHIDDR PLKCPWKGCK MTFKWAWART EHIRVHTGAR PYVCAEEGCG 1560 QTFRFVSDFS RHKRKTGHST KKARG

Sequence ? help Back to Top

Protein Sequence Length: 1585 aa Download sequence

MAASNLSPEP SQEVFSWLKS LPLAPEYRPS LAEFQDPIAY IFKIEKEASQ YGICKIIPPV  60
PPAPKRTAIG NLNRSLVARA AANASSDSKP APTFTTRQQQ IGFCPRKQRP VQKPVWQSGE  120
YYTFQEFEAK AKSFERNYLK RYSKKGSLSA LEVETLFWKA TVDKPFSVEY ANDMPGSAFV  180
PLDSKKSSVG GREAGEGVTV GETPWNMRAV SRAKGSLLRF MKEEIPGVTS PMVYIAMLFS  240
WFAWHVEDHD LHSLNYLHMG AAKTWYGVPR DAAVAFEEVV RVDGYAGEFN PLVTFSTLGE  300
KTTVMSPEVF ICAGVPCCRV PMSIGAKPKS SRLKDKNKSE GETLVKKLFV QNLIQNNDLL  360
HILGKGSSVV LLPKCSSDSS LCSELRVASQ LRTNPRISLG LCNYKEVRES SETLASDEIM  420
LGRSEEIKAV KGFYSVKGKF VTIYEGNRDS SFRGTDYTCR LPTQTLNTNI ERESAVQADA  480
LSDQRLFSCV TCGILCFDCI AVLQPTEQAA RYLMSADCSF FNDWTVGSGL THDGFTAAHG  540
DAITSEQNPC TRRINRSAPN ALYDVPVQSV EYKFQMVDQT NQVVEDTKEG GDTSALGLLA  600
SAYGNSSDSE DHVEPNATVF GDETSSANTS PGRKFQYNGS GFSPGNANRS HTSSLSRLDS  660
EEEAPIHVTD SCSEPGSRRV DIKYRSPQTV DRAVEFETDN LASGRSNSLE DKFRDPITVS  720
HANPSCSPAT HGTEKMRCSK AIAPMENADI PYAPRSDEDS SRMHVFCLEH AVEAEQQLRQ  780
IGGVHVFLLC HPEYPKIEAE AKLVAEELEI DYQWNDILFG DATKDDEERI HSALDSEDAL  840
HGNGDWAVKL GINLFYSANL SRSTLYSKQM PYNCVIYSAF GRKSPASSPT KLNRYGRRSS  900
KQKKVVAGKW CGKVWMSNQV HPFLAQRDPD EQEQERCFHA WATSDENLER KRENVQKAET  960
TKVAKVFNRK RKMRAEIAPS KKVTCIEPQG AVSDDSLDGS SLRQQQRFFR GKQPRLIEKE  1020
EAISYDSLED DSLLLCRNLS RRKQAKFLER EAAESEDEEE DFNAQQHWRN LRGKQGKYFE  1080
EDDVVSGDSL DESSLKQYRR IRRSRQAKFM EVEDAVSDDE QEEISHQLQR RIPRGRQIKS  1140
FERNDAISDY SRADNALKQY RRISKGKHPK FFERDYAMSD DASDDDSQRH LRRIPRGKHM  1200
KRMERDYAFS DDSLEDNPQQ QHRRRSKVAK YTDREVVVSF GPLKGNSHQQ HRKVPRSKRT  1260
KYIEREDAVL SDSPGDSSLQ QLRRIARSKH TKILKREDAV SDDSLDDTSP KQLRKTPRSR  1320
QGKFIERENA VSYDSLEENY HQPNRNLRSR KKKAQTPRQI QQETPQNVKQ GKRRTTKQVV  1380
SQQMKLETPR NRNTKIEQSA RQCNSYGEDE IEGGPSTRLR KRVRKPLKES EAKPKEKKQA  1440
SKKKVKNASN VKTLAGHNTA KVKDEEAEYQ CDMEGCTMSF GLKQELVLHK RNICPVKGCG  1500
KKFFSHKYLV QHRRVHIDDR PLKCPWKGCK MTFKWAWART EHIRVHTGAR PYVCAEEGCG  1560
QTFRFVSDFS RHKRKTGHST KKARG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	950	972	RKRENVQKAETTKVAKVFNRKRK
2	1418	1424	RLRKRVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein