PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769795.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 418aa MW: 47458.4 Da PI: 4.756

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769795.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.9	3e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+ Ede+l ++++ G g+W++ ++ g+ R++k+c++rw +yl XP_022769795.1 14 RGRWTAKEDEILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 8*****************************99**********97 PP
2	Myb_DNA-binding	56.5	6.5e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE+e+++++++ lG++ W++Ia++++ gRt++++k++w+++l XP_022769795.1 67 RGNITAEEEEIIINLHAILGNK-WSLIASHLP-GRTDNEIKNYWNSHL 112 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MGRAPCCEKV GLKRGRWTAK EDEILTKYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI TAEEEEIIIN LHAILGNKWS LIASHLPGRT DNEIKNYWNS HLSRKIYGFR 120 RPSSQSLPVI MDMTKVGIAE RKGGRRSRWP MKKNKSYSTK KDAGSSSNKP MKNVSVNEVV 180 QFPSTPLLEK ETLSTTAIED CMALDPYEED KERMIPVITS DCQKTGEGML GSSEERESLV 240 PISGEEGTIE NSMLCPSGNI EKETDILAPF ESIESSMMLC FNDIIDSEFL QPNGDLALRE 300 WGENKITVNV EEKERSGYLS PNKTTATNEE IGSGNTNEDC GDLNSCSITS CFVVDDCNLD 360 NLYWDWESVV QGNELWEEEY ISSWLWKCDY NGKGERYKLE DKDLEFERHN SMVAWLFS

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MGRAPCCEKV GLKRGRWTAK EDEILTKYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRADLKRGNI TAEEEEIIIN LHAILGNKWS LIASHLPGRT DNEIKNYWNS HLSRKIYGFR  120
RPSSQSLPVI MDMTKVGIAE RKGGRRSRWP MKKNKSYSTK KDAGSSSNKP MKNVSVNEVV  180
QFPSTPLLEK ETLSTTAIED CMALDPYEED KERMIPVITS DCQKTGEGML GSSEERESLV  240
PISGEEGTIE NSMLCPSGNI EKETDILAPF ESIESSMMLC FNDIIDSEFL QPNGDLALRE  300
WGENKITVNV EEKERSGYLS PNKTTATNEE IGSGNTNEDC GDLNSCSITS CFVVDDCNLD  360
NLYWDWESVV QGNELWEEEY ISSWLWKCDY NGKGERYKLE DKDLEFERHN SMVAWLFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	6e-71	MYB family protein