PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022769738.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ERF | ||||||||
Protein Properties | Length: 191aa MW: 21252.6 Da PI: 9.2234 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.7 | 6.9e-19 | 41 | 90 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+Wv+eIr+p++ + r++lg+f +e+Aaka++ a+ +l+g XP_022769738.1 41 NYRGVRKRR-WGKWVSEIREPRK---KSRIWLGSFPKPEMAAKAYDVAAFCLRG 90 69****887.**********843...6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MDQQPYTEDG LNTSTSTITT TTTTKTHSKH DSKGGGTRHP NYRGVRKRRW GKWVSEIREP 60 RKKSRIWLGS FPKPEMAAKA YDVAAFCLRG RKAQLNFPDD VEDLPRPSTC TARDIQAAAA 120 KAAHSVVSSK KSQVSSKGGD GHGGDDFWGE IELPELMNNG CQWYSRGWTF AGDSSWLEGE 180 AQQQQQFLAC L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01250.1 | 4e-58 | ERF family protein |