PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769699.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 344aa MW: 36457.6 Da PI: 9.7185

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769699.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	120.7	1.7e-37	69	168	2	102
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95 ++k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ + + + s+++ ++ ++ XP_022769699.1 69 PPKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsV--NGTLKIPTTSNANPEPRDP 161 789*************************************************************8888855521..2222222222222222222 PP TCP 96 kskksqk 102 ++kk+++ XP_022769699.1 162 SKKKRKR 168 1111111 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MAAILKQEVE EDEDARAVDL GINGGGYAVA ASKNPKEEPD TETAIGVMPM EVHVPSAIPM 60 PLLPAPPAPP KRASTKDRHT KVEGRGRRIR MPATCAARIF QLTRELGHKS DGETIRWLLE 120 HAEPAIIAAT GTGTVPAIAM SVNGTLKIPT TSNANPEPRD PSKKKRKRPA NSEYVDINDT 180 MSVSSGLAPV ITSQQQLQQQ QQAVLPQGLV PVWAIPSNAV VSGAFFMVPS MSSMAGPSTQ 240 PHILTFPATA TPLINISARP ISSFVSTIQH GAGLAAATPG QIQSNVAVAS STLPVSKTVK 300 TTSVMAPSSS SAATTTTTTQ MLRDFSLEIY DKQELQFMTR SSKH

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MAAILKQEVE EDEDARAVDL GINGGGYAVA ASKNPKEEPD TETAIGVMPM EVHVPSAIPM  60
PLLPAPPAPP KRASTKDRHT KVEGRGRRIR MPATCAARIF QLTRELGHKS DGETIRWLLE  120
HAEPAIIAAT GTGTVPAIAM SVNGTLKIPT TSNANPEPRD PSKKKRKRPA NSEYVDINDT  180
MSVSSGLAPV ITSQQQLQQQ QQAVLPQGLV PVWAIPSNAV VSGAFFMVPS MSSMAGPSTQ  240
PHILTFPATA TPLINISARP ISSFVSTIQH GAGLAAATPG QIQSNVAVAS STLPVSKTVK  300
TTSVMAPSSS SAATTTTTTQ MLRDFSLEIY DKQELQFMTR SSKH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	158	167	PRDPSKKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	4e-76	TCP family protein