PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022769695.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 227aa MW: 26140 Da PI: 9.5182 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.1 | 1.3e-29 | 22 | 71 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRr g+lKKA+ELSvLCdaeva+iifs++gklye++s XP_022769695.1 22 RIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 71 8***********************************************86 PP | |||||||
2 | K-box | 88.2 | 1.6e-29 | 90 | 180 | 8 | 97 |
K-box 8 s.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +e+++++l++e+a++ k+ie Lq + R+llGe+L+s++l+eLqq+eqqLe+s++++R++K+++++eqie+l++kek l en +L +k XP_022769695.1 90 TtPTEQNMQHLKTESANMVKKIELLQVSRRKLLGECLGSCTLEELQQIEQQLERSVSRVRARKTQVFKEQIEQLKEKEKVLAAENARLCEK 180 237899********************************************************************************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MIASVFLLEG AEMVRGKTQM RRIENATSRQ VTFSKRRSGL LKKAFELSVL CDAEVALIIF 60 SPRGKLYEFA SSSMQETIER YMRHTKDNRT TPTEQNMQHL KTESANMVKK IELLQVSRRK 120 LLGECLGSCT LEELQQIEQQ LERSVSRVRA RKTQVFKEQI EQLKEKEKVL AAENARLCEK 180 CGTQPWKGSN EKKENVPYDE SNPCSNVETE LFIGLPEGRT KRTLQHN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 3e-79 | MIKC_MADS family protein |