PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022769145.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 867aa    MW: 95563 Da    PI: 4.9044
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022769145.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3772.1e-2467168199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        ++++ + ++l+++d++ ++W++++iyr++++r++lt+GW+ Fv +++L++gD+v+F   +++
  XP_022769145.1  67 FCKTLTASDTSTHGGFSVPRRAAEKLfppldytMQPP-T-QELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFI--RDE 157
                     99*********************999*****954444.4.38************************************************..457 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+v+v+r+
  XP_022769145.1 158 KSQLLVGVRRA 168
                     7778*****97 PP
2Auxin_resp114.78.4e-38193276183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+++s+F+++YnPra++seFv+++ +++k+++ ++vsvGmRf m+fete+s +rr++Gt+vg+sdldp+rWp+SkWr+L+
  XP_022769145.1 193 AAHAAANRSPFTIFYNPRACPSEFVIPLPRYRKSVYgSQVSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQ 276
                     79**********************************99********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 867 aa     Download sequence    
MATSQIPSYP NLPSQLMCQV HNVTLHADKD TDEIYAQMSL QPVNTEKDVF PIPDFGLKPS  60
KHPNEFFCKT LTASDTSTHG GFSVPRRAAE KLFPPLDYTM QPPTQELVVR DLHDNTWTFR  120
HIYRGQPKRH LLTTGWSLFV GSKRLRAGDS VLFIRDEKSQ LLVGVRRANR QQTTLPSSVL  180
SADSMHIGVL AAAAHAAANR SPFTIFYNPR ACPSEFVIPL PRYRKSVYGS QVSVGMRFGM  240
MFETEESGKR RYMGTIVGIS DLDPLRWPGS KWRNLQVEWD EPGCNDKQNR VSAWEIETPE  300
SLFIFPSLTS GLKRPFHTGI LGAESEWGSL IKRPLLQFPE NGNGSLPYSI SNLCSEQLMK  360
MMLKPQLVSH PGIFASTLQQ ISAAKGSPLE EMKNMQSTSN QKPQPIQSEN LLIESQNLSQ  420
LVPDQPDPIN SNLPKINANG NLHPANKLES QTQARSNDEK LKLDSEHSTD QLSQMTSISE  480
CNEEKLEANA VSPSSILNQL SFSNQSQMPF QLQNNPWPIQ SQLESSVLQA HQIQLSQADI  540
SNLSSFLPFI DANEWTPHLS SCQPLAGIYK SPGPTLAVGL QDSSAVLPEA TNSSLTTGGQ  600
DTWDHQLNNC RVLYQADQLT SFTQQDPCSL NSGGLRDLSD DSNNQSGIYS CLNIDVSNGG  660
STVIDPSVSS VILDELCSLK DADFQNPSDC LVGNFSSSQD VQSQITSASL ADSQAFSRQD  720
LPDSSGGTSS SNIDFDESGL LQNNSWHQMA PRVRTYTKVQ KAGSVGRSID VTSFKNYGEL  780
ISAIESMFGL KGLLDDPRGS GWKLVYVDYE NDVLLVGDDP WDEFVGCVRC IRILSPTEVQ  840
QMSEEGMKLL NSATMQGING FDSGCNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein