PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022768973.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 491aa MW: 51382.8 Da PI: 9.323 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.4 | 2.6e-05 | 69 | 91 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022768973.1 69 FVCEICKKGFQRDQNLQLHRRGH 91 89*******************88 PP | |||||||
2 | zf-C2H2 | 15.8 | 4e-05 | 145 | 167 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k + +s+ k H++t+ XP_022768973.1 145 WKCERCSKKYAVQSDWKAHMKTC 167 58*******************98 PP | |||||||
3 | zf-C2H2 | 11.5 | 0.00094 | 175 | 193 | 5 | 23 |
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg+ Fsr+++L +H + XP_022768973.1 175 DCGTIFSRRDSLITHRAFC 193 8**************8765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 491 aa Download sequence |
MVELENSSPM AVSRVSGEAS ASSSGHQIQG TQQTGEGTPK KKRNLPGMPD PDAEVMALSP 60 KTLLATNRFV CEICKKGFQR DQNLQLHRRG HNLPWKLRQR TSKEIRKRVY VCPEPSCVHH 120 NPARALGDLT GIKKHFCRKH GEKKWKCERC SKKYAVQSDW KAHMKTCGTR EYKCDCGTIF 180 SRRDSLITHR AFCDALAEES ARAQTLEMAD TEGNGSGKSM VGSGAASTSP PPQPLTPSTT 240 SVVSPGLSIQ SSEIPENPMG LSPPTPAATS TSPSNSNVFA SVFAPNSQPS KIPAPSSILQ 300 SGAPLERTSL SLSSRLYLSN NGSSIFSGPE HDHCHYAPSP QPAMSATALL QKAARMGSAA 360 SNPSLLRGLG LAISSTSSDG KDPNVKSESN SMATGFGLGL PTNGSSGLTN TMIGISSSSL 420 FGNKPTTLDL LGLGMGDGGA SSSGLSALLT SFGGGFNVGA AATTSYGTGG SSPGETWEGA 480 PDRKPTGPTM L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66730.1 | 1e-111 | C2H2 family protein |