PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022768710.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 313aa MW: 34160.5 Da PI: 8.2118

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022768710.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.2	8.9e-19	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+ +G+++W++I++ ++ gR++k+c++rw + XP_022768710.1 12 KGPWSPEEDEALQRLVQTYGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57 79****************************.*********985 PP
2	Myb_DNA-binding	56.1	8.8e-18	66	108	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEd+ +++a++++G++ W+tIar ++ gRt++ +k++w++ XP_022768710.1 66 PFTPEEDDTIIRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 108 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MASTKKDVDR IKGPWSPEED EALQRLVQTY GPRNWSLISK SIPGRSGKSC RLRWCNQLSP 60 DVEHRPFTPE EDDTIIRAHA RFGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSSMIDDL 120 NDDSPQPLKR SASLGTGNNV SALYLNPSSP SGSDLSDSSL PAASPVYRPL ARTGSLAPSS 180 QHVETASSTT DPPTILSLSL PGSDLCEISD RGPVSTTGSN PVSIPTQVAE KVEPPAPAPA 240 AVPVVQLQQV GAQNREFGME RQFFSAEFLA VMQEMIRKEV RNYMSGIEKN GLCLQTEAIR 300 NAVVKRIGIS NIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	4e-83	MYB family protein