PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022768542.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 331aa MW: 36721.9 Da PI: 6.5207

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022768542.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.9	7.1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +lv +++++G+g+W+++++ g+ R+ k+c++rw +yl XP_022768542.1 14 KGPWTPGEDIILVSYIQEHGPGNWRSVPSNTGLLRCSKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	50.7	4.2e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l XP_022768542.1 67 RGNFTEQEEQMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MGRPPCGDKI GAKKGPWTPG EDIILVSYIQ EHGPGNWRSV PSNTGLLRCS KSCRLRWTNY 60 LRPGIKRGNF TEQEEQMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLKKVQ 120 TGVDGQSQDG FFSTQSVSKG QWERRLQTDI RMAKQALSEA LSIDKLNSLT GSKDINLSHP 180 YLRPSLSQGS TYASSAENIS RLLENWMKNP PKPAAHQTNS GETMTQNSFN NTMTAGSSSS 240 DEGAFNATTP EAFDSFFSFN SSNSDVSHES VSVDQNANLT PENSLFQEES KPNLGTQVPL 300 TLIEKWLLDD SSAQAPEDLI TMTLEDSTGL F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	1e-106	MYB family protein