PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767833.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WRKY

Protein Properties

Length: 585aa MW: 63941.2 Da PI: 5.7223

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767833.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.7	2.4e-33	253	311	1	60
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 ++DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k XP_022767833.1 253 VEDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGSHNHPK 311 58**************************************.*************85 PP
2	WRKY	104.5	5.9e-33	416	474	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d ++v++tYeg+Hnh+ XP_022767833.1 416 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTIGCPVRKHVERASHDLRAVITTYEGKHNHD 474 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MASSQSGSNT SINFEAALSF SSSNPLPMAA SSSFMNMDNI QGRRSASIPS WGLSDHPTET 60 DDKFGIEIPK LKSLAPSSLP ISPTPVSPSS YFATTPLAAF SSNDFLDSPV LFSTSSIFPS 120 PTTGAFAGQT LNWSCSNSND NQQVNKGEPN NFFDFSFQPQ PRPSTTSSSS TIQSSSNIVS 180 VEQLTWNFSE PMKQPDLTLE KVGGVKSEFA PMQNFSTEMA PLQTNLQSNT VSQPAGYNQY 240 NQSSQFIRES GKVEDGYNWR KYGQKQVKGS ENPRSYYKCT YPNCPTKKKV ERSLDGQITE 300 IVYKGSHNHP KPQSTRRSSS HTACTNSEIS DQSVGTLGTE QTDSFLMQED NSGSLAEDDF 360 DQASPISNPG GDDNENEPDA KRWKGENEDE VIIGSGSRTV REPRIVVQTT SDIDILDDGY 420 RWRKYGQKVV KGNPNPRSYY KCTTIGCPVR KHVERASHDL RAVITTYEGK HNHDVPAARG 480 SGYAINRPPT ASNSNAPMAM PIRPSAVPSQ PSNTSYPNSI QTRLPTSGSQ IPVTLEMLQN 540 TGDFGFSGKP IGSYMSQAQF SEGAFARAKD EPRDDSCLDG FLSWK

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MASSQSGSNT SINFEAALSF SSSNPLPMAA SSSFMNMDNI QGRRSASIPS WGLSDHPTET  60
DDKFGIEIPK LKSLAPSSLP ISPTPVSPSS YFATTPLAAF SSNDFLDSPV LFSTSSIFPS  120
PTTGAFAGQT LNWSCSNSND NQQVNKGEPN NFFDFSFQPQ PRPSTTSSSS TIQSSSNIVS  180
VEQLTWNFSE PMKQPDLTLE KVGGVKSEFA PMQNFSTEMA PLQTNLQSNT VSQPAGYNQY  240
NQSSQFIRES GKVEDGYNWR KYGQKQVKGS ENPRSYYKCT YPNCPTKKKV ERSLDGQITE  300
IVYKGSHNHP KPQSTRRSSS HTACTNSEIS DQSVGTLGTE QTDSFLMQED NSGSLAEDDF  360
DQASPISNPG GDDNENEPDA KRWKGENEDE VIIGSGSRTV REPRIVVQTT SDIDILDDGY  420
RWRKYGQKVV KGNPNPRSYY KCTTIGCPVR KHVERASHDL RAVITTYEGK HNHDVPAARG  480
SGYAINRPPT ASNSNAPMAM PIRPSAVPSQ PSNTSYPNSI QTRLPTSGSQ IPVTLEMLQN  540
TGDFGFSGKP IGSYMSQAQF SEGAFARAKD EPRDDSCLDG FLSWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-135	WRKY family protein