PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767546.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 357aa MW: 41113 Da PI: 9.6601

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767546.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.2	1.2e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++ +++m+ ++R +k+c +rw++yl XP_022767546.1 4 RQRWRAEEDALLRAYVKQYGPREWNLLSQRMNapLNRDAKSCLERWNNYL 53 89***********************************************7 PP
2	Myb_DNA-binding	36.3	1.3e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + XP_022767546.1 59 KGSLTEEEQRLVIHLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MKERQRWRAE EDALLRAYVK QYGPREWNLL SQRMNAPLNR DAKSCLERWN NYLKPGIKKG 60 SLTEEEQRLV IHLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKEKNKTVDP 120 IEEGKYDRIL ETFAEKLVKE RHSSAFPMAT SNGGFLHTDP PSPTPTVLPP WLSNSSNASA 180 VRPPSPSVTL SLSPSTVAAT PPIPWLQPEK MSENTPVALV NMAPIGSVPP CGENLLISEL 240 AECCRELEEG HRAWVAHEKE AAWRLRRVEL QLESEKACRR REKMEEIESK VKALREEQKA 300 TLDRIEAEYR EQLEGLRRDA EAKEQKLAEQ WAAKHLRLTK FLEQMGCRPR LAEPNGR

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MKERQRWRAE EDALLRAYVK QYGPREWNLL SQRMNAPLNR DAKSCLERWN NYLKPGIKKG  60
SLTEEEQRLV IHLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKEKNKTVDP  120
IEEGKYDRIL ETFAEKLVKE RHSSAFPMAT SNGGFLHTDP PSPTPTVLPP WLSNSSNASA  180
VRPPSPSVTL SLSPSTVAAT PPIPWLQPEK MSENTPVALV NMAPIGSVPP CGENLLISEL  240
AECCRELEEG HRAWVAHEKE AAWRLRRVEL QLESEKACRR REKMEEIESK VKALREEQKA  300
TLDRIEAEYR EQLEGLRRDA EAKEQKLAEQ WAAKHLRLTK FLEQMGCRPR LAEPNGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-146	MYB family protein