PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767192.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 462aa MW: 52968.9 Da PI: 6.3024

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767192.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	78.5	1e-24	94	193	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpy 81 +Wt+++v++Li a+ +++++++++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +++ +++++++ ++ XP_022767192.1 94 KWTDNMVKLLIMAVYYIGDEIGSEGndptgkkkaggllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGRGtACRVVENQSL 188 7**************999996433677778999999******************************************559****** PP trihelix 82 fdqle 86 +d ++ XP_022767192.1 189 LDTMD 193 *9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MLGLETPLHP QQQQPQNLQS AQNPHNLHHH SQMVAFSHRE TDHSQHQQSV KQGYPFVSKT 60 KRTSPLSDED EPGFTHDDGA ADAKRKFSPW QRMKWTDNMV KLLIMAVYYI GDEIGSEGND 120 PTGKKKAGGL LQKKGKWKSV SRAMMEKGFY VSPQQCEDKF NDLNKRYKRV NDILGRGTAC 180 RVVENQSLLD TMDLSPKMKE EVKKLLNSKH LFFREMCAYH SSCGHGAAAG TSGANHSPEV 240 ATETSQIQHQ QAQQQRCLHS SDNAQIAGNS GRIETEVPKL SKVGSEEEDD DEDDDEDDDE 300 DDDEDVEEAM DGHSRGQEDD EENDEKSSRK RPRKGAFAMS LSPLMQQLSS EVMNVIQDGS 360 RSAWEKKHWM KMRLMQLEEQ QVSYQYKAFE LEKQRLKWVK FSGKKEREME RAKLENERSR 420 LENERMGLLV RQKELELVDL QRHNRPQQHS SNKMGDPSSI TV

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MLGLETPLHP QQQQPQNLQS AQNPHNLHHH SQMVAFSHRE TDHSQHQQSV KQGYPFVSKT  60
KRTSPLSDED EPGFTHDDGA ADAKRKFSPW QRMKWTDNMV KLLIMAVYYI GDEIGSEGND  120
PTGKKKAGGL LQKKGKWKSV SRAMMEKGFY VSPQQCEDKF NDLNKRYKRV NDILGRGTAC  180
RVVENQSLLD TMDLSPKMKE EVKKLLNSKH LFFREMCAYH SSCGHGAAAG TSGANHSPEV  240
ATETSQIQHQ QAQQQRCLHS SDNAQIAGNS GRIETEVPKL SKVGSEEEDD DEDDDEDDDE  300
DDDEDVEEAM DGHSRGQEDD EENDEKSSRK RPRKGAFAMS LSPLMQQLSS EVMNVIQDGS  360
RSAWEKKHWM KMRLMQLEEQ QVSYQYKAFE LEKQRLKWVK FSGKKEREME RAKLENERSR  420
LENERMGLLV RQKELELVDL QRHNRPQQHS SNKMGDPSSI TV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	5e-49	Trihelix family protein