PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022767032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 261aa MW: 29858.5 Da PI: 8.4622 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 141 | 7.1e-44 | 4 | 138 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 +ppGfrF Pt+eelv++yL++k+e+k+ +++vi+ vdiy+++PwdLp+ ++++ ++w+fF++r++++ +g r++r t++gyWkatg XP_022767032.1 4 MPPGFRFYPTEEELVSFYLHHKLERKRedlnRLMDRVIPIVDIYDFNPWDLPQfslqLCHKDPEQWFFFIPRQENEVRGGRPRRLTSTGYWKATG 98 79************************96653223347**************9556653344667******************************* PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 + v+s++++ +g+k+t+vfy+grap+g+kt+W m+ey+ XP_022767032.1 99 SPGCVYSSGNRPIGIKRTMVFYNGRAPNGRKTEWKMNEYK 138 ***************************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 261 aa Download sequence |
MKDMPPGFRF YPTEEELVSF YLHHKLERKR EDLNRLMDRV IPIVDIYDFN PWDLPQFSLQ 60 LCHKDPEQWF FFIPRQENEV RGGRPRRLTS TGYWKATGSP GCVYSSGNRP IGIKRTMVFY 120 NGRAPNGRKT EWKMNEYKAI EEADSSNGAT PSLRHEFSLC RVYKKSKCLR SFDRRPPAVG 180 AQICEPAAVH QSQATVGAAA SQHQSPRLKA PERTISSPES SSSGDHRNPS QTGESSNSSA 240 MVVDYDEFFW NLDGFWESGI P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22380.1 | 5e-71 | NAC family protein |