PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767020.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 485aa MW: 54131.5 Da PI: 7.837

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.3	8.2e-09	59	84	1	27
TSSS-HHHHHHHHHHHHHTTTT-HHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktI 27 r +WT+eE++++++a +++G g W+ I XP_022767020.1 59 REKWTEEEHQKFLEALRLYGRG-WRQI 84 789******************.998 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MATQDQIEGT TLPNALKSGI CSSNVSPQSE TLTQLQEIYK FRHDHTPKVR KPYTITKQRE 60 KWTEEEHQKF LEALRLYGRG WRQIEGKCSV ARNGFTFLPQ LWFEQLKVVR HSNVGFEDSI 120 KPVEIPPPRP KRKPIHPYPR KSVDSFKGIS SSSQYERSPS PNKFVREQDN KSPTSVLSAF 180 ASDAMGSAAS EQQNGCSSPT SCTTNMQSIN TSPVEKENDY VTSTSSAEEE KTSLSSGKVF 240 GHLAVEDILP TKFNEDFKNS MCAKGNAAIV VPFTSIKLFG KTVQVKDSPE PSIGAENFKS 300 STSKSGQEDV NAVSEMLVQA LPATYLDTHL SLGTVINNWN VVPSRANLSP YREIHPDKND 360 HVESTRDASL PWWAFYQGLP FYYITSFNQT PTDSCVEEMM NEKEILKERS CSGSNTGSVS 420 QAENREKTSY SVDSKCQYPC PGGKTTPQKC SKGFVPYKRC LAERDTSSSV LASEEQERQR 480 ARVCS

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MATQDQIEGT TLPNALKSGI CSSNVSPQSE TLTQLQEIYK FRHDHTPKVR KPYTITKQRE  60
KWTEEEHQKF LEALRLYGRG WRQIEGKCSV ARNGFTFLPQ LWFEQLKVVR HSNVGFEDSI  120
KPVEIPPPRP KRKPIHPYPR KSVDSFKGIS SSSQYERSPS PNKFVREQDN KSPTSVLSAF  180
ASDAMGSAAS EQQNGCSSPT SCTTNMQSIN TSPVEKENDY VTSTSSAEEE KTSLSSGKVF  240
GHLAVEDILP TKFNEDFKNS MCAKGNAAIV VPFTSIKLFG KTVQVKDSPE PSIGAENFKS  300
STSKSGQEDV NAVSEMLVQA LPATYLDTHL SLGTVINNWN VVPSRANLSP YREIHPDKND  360
HVESTRDASL PWWAFYQGLP FYYITSFNQT PTDSCVEEMM NEKEILKERS CSGSNTGSVS  420
QAENREKTSY SVDSKCQYPC PGGKTTPQKC SKGFVPYKRC LAERDTSSSV LASEEQERQR  480
ARVCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	1e-23	MYB_related family protein