PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766434.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 353aa MW: 39747.5 Da PI: 7.4018

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.4	1.4e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++q+G+g +W + ++++g++R++k+c++rw++yl XP_022766434.1 14 KGPWSPEEDAKLKEYIEQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.5	2.6e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd+++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_022766434.1 69 GGFSEEEDKIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKEYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDKIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKEQQSRRG NSLKQDMKRS ENGDSMLPDY NNQSPYWPEL PVLAVPTPYS SQEQRIDSQA 180 SMRRLLIKLG GRFSDDGHVV NDGTTLHNQF PNDSSSTDQQ LYEQTVHLLS SSSSSYSPMD 240 ALNNINRGTQ FVNCQPTIDG ANLHMLQGQS SSFSSELQEM AYSNPQRLDG MEFLFGEDMV 300 NNRAVTNSCE SIVWGDTTSQ LVCLPVASDQ YGGIQQGMLQ EYAFSELRYP GAQ

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKEYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDKIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKEQQSRRG NSLKQDMKRS ENGDSMLPDY NNQSPYWPEL PVLAVPTPYS SQEQRIDSQA  180
SMRRLLIKLG GRFSDDGHVV NDGTTLHNQF PNDSSSTDQQ LYEQTVHLLS SSSSSYSPMD  240
ALNNINRGTQ FVNCQPTIDG ANLHMLQGQS SSFSSELQEM AYSNPQRLDG MEFLFGEDMV  300
NNRAVTNSCE SIVWGDTTSQ LVCLPVASDQ YGGIQQGMLQ EYAFSELRYP GAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	7e-77	MYB family protein