PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022766413.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ZF-HD | ||||||||
Protein Properties | Length: 254aa MW: 27458.4 Da PI: 7.233 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 104.3 | 7.5e-33 | 55 | 110 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 +rY+eClkNhA+s+GghavDGCgEf+++ g+egt++alkCaAC+CHRnFHR+e+e XP_022766413.1 55 MIRYRECLKNHAVSIGGHAVDGCGEFIAA-GDEGTIDALKCAACNCHRNFHRKETEG 110 689*************************9.999*********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MDFDEHEEQE EEMGMAVPPG YDSLGNSSAA RSNMRPASGS GEGAASAATR KVGSMIRYRE 60 CLKNHAVSIG GHAVDGCGEF IAAGDEGTID ALKCAACNCH RNFHRKETEG EGNIYNPHHQ 120 QHHPQFSPFY RAPPPAGYLH LTPPPQHRPL ALPAASGGGG GATAGGYSRE DEDVSNPSSS 180 GGGGGGSGGL KKRFRTKFTP EQKDKMLDFS ERLGWRIQKH DETAVEQFCE ETGLKRHVLK 240 IWMHNNKHTL GKKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 7e-71 | ZF-HD family protein |